Spartina alterniflora invasion has a greater impact than non-native species, Phragmites australis and Kandelia obovata, on the bacterial community assemblages in an estuarine wetland.

The invasion of Spartina alterniflora poses a serious threat to the sustainability of native ecosystems worldwide. However, compared with other non-native plants (e.g., Phragmites australis and Kandelia obovata), how Spartina alterniflora invasion influences the community structure of bacteria and their assembly processes and functionality remains elusive. Here, we characterized the diversity, community structure, assembly processes and functional guilds of bacteria underneath five plant species and a bare tidal flat at three soil depths in an estuarine wetland. We found that plant species played a more important role than soil depth in mediating the bacterial community structure. Compared with bare tidal flats, the native species Cyperus malaccensis, rather than Scirpus triqueter, significantly changed the bacterial community structure. However, S. alterniflora invasion increased bacterial alpha diversity and significantly altered the bacterial community structure by enriching Chloroflexi, Bacteroidetes and Firmicutes while reducing Acidobacteria, Nitrospirae and Gemmatimonadetes. The invasion of P. australis and translocation of K. obovata had less pronounced effects on the bacterial community structure. Total carbon, total nitrogen and salinity were the key environmental factors mediating the bacterial community structure. Overall of all the non-native plant species, the invasion of S. alterniflora increased the relative importance of stochastic processes in the assembly of bacterial communities, and shifted the bacterial functional profiles by stimulating sulfur cycling groups and suppressing nitrogen cycling groups. Altogether, our results suggest that S. alterniflora invasion has a greater effect than P. australis invasion or K. obovata translocation on the profiles and assembly processes of the bacterial communities, with important implications for soil biogeochemical processes in coastal wetlands.

Lin Y ，Hu HW ，Yang P ，Ye G ... -  《-》

Seasonal variations in soil physicochemical properties and microbial community structure influenced by Spartina alterniflora invasion and Kandelia obovata restoration.

Spartina alterniflora invasion has initiated one of the greatest changes to occur in coastal wetlands in China, and ecological replacement using mangrove species such as Kandelia obovata is an effective method for controlling these invasions. The effects of S. alterniflora invasions and subsequent K. obovata restorations on soil microbial community structures in different seasons are still not fully understood. In this study, soil samples were collected from six vegetation types (unvegetated mudflat, invasive S. alterniflora stands, one-/eight-/ten-year K. obovata restoration areas, and native mature K. obovata forests) in summer and winter. The variations in the soil microbial community structure between the vegetation types across two seasons were then characterized based on 16S rRNA gene sequencing, and the physicochemical properties that shaped the microbial communities were also determined. The invasion and restoration processes significantly influenced microbial community diversity, composition, and putative functions in different seasonal patterns. Microbial communities from a ten-year restoration area and a native mature K. obovata area shared more similarities than other areas. In both seasons, the key environmental factors driving microbial community included total carbon and nitrogen content, the ratio of carbon to nitrogen, and the soil pH. In addition, total sulfur and total phosphorus contents significantly contributed to structuring microbial communities in summer and winter, respectively. This study provides insights into microbial diversity, composition, and functional profiles in association with physicochemical impacts, with the aim of understanding microbial ecological functions during the invasion and restoration processes in wetland ecosystems.

Lin G ，He Y ，Lu J ，Chen H ，Feng J ... -  《-》

Mangrove afforestation as an ecological control of invasive Spartina alterniflora affects rhizosphere soil physicochemical properties and bacterial community in a subtropical tidal estuarine wetland.

The planting of mangroves is extensively used to control the invasive plant Spartina alterniflora in coastal wetlands. Different plant species release diverse sets of small organic compounds that affect rhizosphere conditions and support high levels of microbial activity. The root-associated microbial community is crucial for plant health and soil nutrient cycling, and for maintaining the stability of the wetland ecosystem. High-throughput sequencing was used to assess the structure and function of the soil bacterial communities in mudflat soil and in the rhizosphere soils of S. alterniflora, mangroves, and native plants in the Oujiang estuarine wetland, China. A distance-based redundancy analysis (based on Bray-Curtis metrics) was used to identify key soil factors driving bacterial community structure. S. alterniflora invasion and subsequent mangrove afforestation led to the formation of distinct bacterial communities. The main soil factors driving the structure of bacterial communities were electrical conductivity (EC), available potassium (AK), available phosphorus (AP), and organic matter (OM). S. alterniflora obviously increased EC, OM, available nitrogen (AN), and NO3 --N contents, and consequently attracted copiotrophic Bacteroidates to conduct invasion in the coastal areas. Mangroves, especially Kandelia obovata, were suitable pioneer species for restoration and recruited beneficial Desulfobacterota and Bacilli to the rhizosphere. These conditions ultimately increased the contents of AP, available sulfur (AS), and AN in soil. The native plant species Carex scabrifolia and Suaeda glauca affected coastal saline soil primarily by decreasing the EC, rather than by increasing nutrient contents. The predicted functions of bacterial communities in rhizosphere soils were related to active catabolism, whereas those of the bacterial community in mudflat soil were related to synthesis and resistance to environmental factors. Ecological restoration using K. obovata has effectively improved a degraded coastal wetland mainly through increasing phosphorus availability and promoting the succession of the microbial community.

Wang J ，Lin X ，An X ，Liu S ，Wei X ，Zhou T ，Li Q ，Chen Q ，Liu X ... -  《PeerJ》

Contrasting nutrient stocks and litter decomposition in stands of native and invasive species in a sub-tropical estuarine marsh.

We compared the influence of invasion by an alien invasive species (Spartina alterniflora, smooth cordgrass) and a native aggressive species (Phragmites australis, common reed) as they have expanded into the native Cyperus malaccensis (shichito matgrass)-dominated wetland ecosystem in the Min River estuary of southeast China. S. alterniflora is a perennial grass native to North America, which has spread rapidly along the southeast coast of China since its introduction in 1979. Our study compared the above and belowground biomass, net primary production, litter decomposition, plant nutrient stocks and soil organic carbon storage of the grasses in three ecosystems: (1) the native ecosystem dominated by C. malaccensis; (2) ecosystems previously dominated by C. malaccensis but presently replaced by P. australis; and (3) ecosystems previously dominated by C. malaccensis but presently replaced by S. alterniflora. Our results demonstrate that the recent invasion (3 years) of the exotic invasive species S. alterniflora has already significantly increased live aboveground biomass and aboveground plant nutrient stocks. However, there was no significant difference in these variables between native aggressive species P. australis and native C. malaccensis. The majority of belowground root Carbon (C), Nitrogen (N) and phosphorus (P) stocks of the three plant species were all distributed in the upper surface layer and there was a decrease with soil depth. There was little difference in litter decomposition rates among the three grass species; they were ranked in the following order: C. malaccensis>S. alterniflora>P. australis. Litter element concentration showed similar patterns for the three species. However, important differences were found between N and P; the litter N concentrations in each of the three species were greater at the end of the 280 days decomposition than at the start, but P concentrations followed a fluctuating pattern during the decomposition period. Soil organic carbon stocks (0-50cm) under S. alterniflora, P. australis and C. malaccensis stands were statistically indistinguishable, which may be due to the invasion of S. alterniflora having been a relatively recent phenomenon. Thus, recent invasion of the exotic species S. alterniflora has already altered the nutrient cycle of C. malaccensis in the ecosystem in the Min River estuary.

Tong C ，Zhang L ，Wang W ，Gauci V ，Marrs R ，Liu B ，Jia R ，Zeng C ... -  《-》

Plant Species-Driven Distribution of Individual Clades of Comammox Nitrospira in a Subtropical Estuarine Wetland.

Plant species play a crucial role in mediating the activity and community structure of soil microbiomes through differential inputs of litter and rhizosphere exudates, but we have a poor understanding of how plant species influence comammox Nitrospira, a newly discovered ammonia oxidizer with pivotal functionality. Here, we investigate the abundance, diversity, and community structure of comammox Nitrospira underneath five plant species and a bare tidal flat at three soil depths in a subtropical estuarine wetland. Plant species played a critical role in driving the distribution of individual clades of comammox Nitrospira, explaining 59.3% of the variation of community structure. Clade A.1 was widely detected in all samples, while clades A.2.1, A.2.2, A.3 and B showed plant species-dependent distribution patterns. Compared with the native species Cyperus malaccensis, the invasion of Spartina alterniflora increased the network complexity and changed the community structure of comammox Nitrospira, while the invasive effects from Kandelia obovata and Phragmites australis were relatively weak. Soil depths significantly influenced the community structure of comammox Nitrospira, but the effect was much weaker than that from plant species. Altogether, our results highlight the previously unrecognized critical role of plant species in driving the distribution of comammox Nitrospira in a subtropical estuarine wetland.

Lin Y ，Ye G ，Hu HW ，Yang P ，Wan S ，Feng M ，He ZY ，He JZ ... -  《-》